[1]
|
Xu W, Liu CF, Yan L, Li JJ, Wang LJ, Qi Y, et al. Distribution of enteroviruses in hospitalized children with hand, foot and mouth disease and relationship between pathogens and nervous system complications. Virol J 2012;9:8. https://doi.org/10.1186/1743-422x-9-8CrossRef
|
[2]
|
Chong CY, Chan KP, Shah VA, Ng WYM, Lau G, Teo TES, et al. Hand, foot and mouth disease in Singapore: a comparison of fatal and non-fatal cases. Acta Paediatr 2003;92(10):1163-9. |
[3]
|
Tan XJ, Huang XY, Zhu SL, Chen H, Yu QL, Wang HY, et al. The persistent circulation of enterovirus 71 in People's Republic of China: causing emerging nationwide epidemics since 2008. PLoS One 2011;6(9):e25662. https://doi.org/10.1371/journal.pone.0025662CrossRef
|
[4]
|
Xiao JB, Huang KQ, Lu HH, Song Y, Han ZZ, Zhang M, et al. Genomic epidemiology and phylodynamic analysis of enterovirus A71 reveal its transmission dynamics in Asia. Microbiol Spectr 2022;10(5):e0195822. https://doi.org/10.1128/spectrum.01958-22CrossRef
|
[5]
|
Song Y, Zhang Y, Han ZZ, Xu W, Xiao JB, Wang XJ, et al. Genetic recombination in fast-spreading coxsackievirus A6 variants: a potential role in evolution and pathogenicity. Virus Evol 2020;6(2):veaa048. https://doi.org/10.1093/ve/veaa048CrossRef
|
[6]
|
Yang F, Yuan J, Wang X, Li J, Du J, Su H, et al. Severe hand, foot, and mouth disease and coxsackievirus A6-Shenzhen, China. Clin Infect Dis 2014;59(10):1504 − 5. https://doi.org/10.1093/cid/ciu624CrossRef
|
[7]
|
Yang XH, Li YY, Zhang CB, Zhan WL, Xie J, Hu SQ, et al. Clinical features and phylogenetic analysis of severe hand-foot-and-mouth disease caused by Coxsackievirus A6. Infect Genet Evol 2020;77:104054. https://doi.org/10.1016/j.meegid.2019.104054CrossRef
|
[8]
|
Zhang Y, Hong M, Sun Q, Zhu SL, Tsewang N, Li XL, et al. Molecular typing and characterization of a new serotype of human enterovirus (EV-B111) identified in China. Virus Res 2014;183:75 − 80. https://doi.org/10.1016/j.virusres.2014.01.002CrossRef
|
[9]
|
Oberste MS, Maher K, Kilpatrick DR, Pallansch MA. Molecular evolution of the human enteroviruses: correlation of serotype with VP1 sequence and application to picornavirus classification. J Virol 1999;73(3):1941 − 8. https://doi.org/10.1128/jvi.73.3.1941-1948.1999CrossRef
|
[10]
|
Katoh K, Rozewicki J, Yamada KD. MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. Brief Bioinform 2019;20(4):1160 − 6. https://doi.org/10.1093/bib/bbx108CrossRef
|
[11]
|
Kozlov AM, Darriba D, Flouri T, Morel B, Stamatakis A. RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inference. Bioinformatics 2019;35(21):4453 − 5. https://doi.org/10.1093/bioinformatics/btz305CrossRef
|
[12]
|
Rambaut A, Lam TT, Max Carvalho L, Pybus OG. Exploring the temporal structure of heterochronous sequences using TempEst (formerly Path-O-Gen). Virus Evol 2016;2(1):vew007. https://doi.org/10.1093/ve/vew007CrossRef
|
[13]
|
Baele G, Lemey P, Bedford T, Rambaut A, Suchard MA, Alekseyenko AV. Improving the accuracy of demographic and molecular clock model comparison while accommodating phylogenetic uncertainty. Mol Biol Evol 2012;29(9):2157 − 67. https://doi.org/10.1093/molbev/mss084CrossRef
|
[14]
|
Drummond AJ, Suchard MA, Xie D, Rambaut A. Bayesian phylogenetics with BEAUti and the BEAST 1. 7. Mol Biol Evol 2012;29(8):1969 − 73. https://doi.org/10.1093/molbev/mss075CrossRef
|
[15]
|
Rozas J, Ferrer-Mata A, Sánchez-DelBarrio JC, Guirao-Rico S, Librado P, Ramos-Onsins SE, et al. DnaSP 6: DNA sequence polymorphism analysis of large data sets. Mol Biol Evol 2017;34(12):3299 − 302. https://doi.org/10.1093/molbev/msx248CrossRef
|