|
[1]
|
MalariaGEN, Abdel Hamid MM, Abdelraheem MH, Acheampong DO, Ahouidi A, et al. Pf7: an open dataset of Plasmodium falciparum genome variation in 20,000 worldwide samples. Wellcome Open Res 2023;8:22. https://doi.org/10.12688/wellcomeopenres.18681.1CrossRef
|
|
[2]
|
Miles A, Iqbal Z, Vauterin P, Pearson R, Campino S, Theron M, et al. Indels, structural variation, and recombination drive genomic diversity in Plasmodium falciparum. Genome Res 2016;26(9):1288 − 99. https://doi.org/10.1101/gr.203711.115CrossRef
|
|
[3]
|
World Health Organization. WHO guidelines for malaria, 14 March 2023. Geneva: World Health Organization; 2023. https://iris.who.int/handle/10665/366432. |
|
[4]
|
McKenna A, Hanna M, Banks E, Sivachenko A, Cibulskis K, Kernytsky A, et al. The genome analysis toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data. Genome Res 2010;20(9):1297 − 303. https://doi.org/10.1101/gr.107524.110CrossRef
|
|
[5]
|
MalariaGEN Plasmodium falciparum Community Project. Genomic epidemiology of artemisinin resistant malaria. eLife 2016;5:e08714. https://doi.org/10.7554/eLife.08714CrossRef
|
|
[6]
|
Excoffier L, Lischer HEL. Arlequin suite ver 3. 5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol Ecol Resour 2010;10(3):564 − 7. https://doi.org/10.1111/j.1755-0998.2010.02847.xCrossRef
|
|
[7]
|
Schaffner SF, Taylor AR, Wong W, Wirth DF, Neafsey DE. hmmIBD: software to infer pairwise identity by descent between haploid genotypes. Malar J 2018;17(1):196. https://doi.org/10.1186/s12936-018-2349-7CrossRef
|
|
[8]
|
Bachmann A, Scholz JAM, Janßen M, Klinkert MQ, Tannich E, Bruchhaus I, et al. A comparative study of the localization and membrane topology of members of the RIFIN, STEVOR and PfMC-2TM protein families in Plasmodium falciparum-infected erythrocytes. Malar J 2015;14:274. https://doi.org/10.1186/s12936-015-0784-2CrossRef
|
|
[9]
|
Tumwebaze PK, Conrad MD, Okitwi M, Orena S, Byaruhanga O, Katairo T, et al. Decreased susceptibility of Plasmodium falciparum to both dihydroartemisinin and lumefantrine in northern Uganda. Nat Commun 2022;13(1):6353. https://doi.org/10.1038/s41467-022-33873-xCrossRef
|
|
[10]
|
Ehrlich HY, Jones J, Parikh S. Molecular surveillance of antimalarial partner drug resistance in sub-Saharan Africa: a spatial-temporal evidence mapping study. Lancet Microbe 2020;1(5):e209 − 17. https://doi.org/10.1016/s2666-5247(20)30094-xCrossRef
|
|
[11]
|
de Vries LE. Steepen the Curve: The Potential of Pantothenamides in Malaria Control. Nijmegen: Radboud University. 2021. https://repository.ubn.ru.nl/handle/2066/240243 |
|
[12]
|
Menard D, Dondorp A. Antimalarial drug resistance: a threat to malaria elimination. Cold Spring Harb Perspect Med 2017;7(7):a025619. https://doi.org/10.1101/cshperspect.a025619CrossRef
|
|
[13]
|
Winzeler EA. Malaria research in the post-genomic era. Nature 2008;455(7214):751 − 6. https://doi.org/10.1038/nature07361CrossRef
|
|
[14]
|
Chan K, Tusting LS, Bottomley C, Saito K, Djouaka R, Lines J. Malaria transmission and prevalence in rice-growing versus non-rice-growing villages in Africa: a systematic review and meta-analysis. Lancet Planet Health 2022;6(3):e257 − e69. https://doi.org/10.1016/S2542-5196(21)00349-1CrossRef
|
|
[15]
|
Manske M, Miotto O, Campino S, Auburn S, Almagro-Garcia J, Maslen G, et al. Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing. Nature 2012;487(7407):375 − 9. https://doi.org/10.1038/nature11174CrossRef
|