He Jiang; Shujia Liang; Xiuling Wu; Jinghua Huang; Bo Li; Xuanhua Liu; Qin Meng; Shuai Tang; Qiuying Zhu; Guanghua Lan; He Jiang; Shujia Liang; Xiuling Wu; Jinghua Huang; Bo Li; Xuanhua Liu; Qin Meng; Shuai Tang; Qiuying Zhu; Guanghua Lan

doi:10.46234/ccdcw2025.073

[1]

Koopsen J, Matthews G, Rockstroh J, Applegate TL, Bhagani S, Rauch A, et al. Hepatitis C virus transmission between eight high-income countries among men who have sex with men: a whole-genome analysis. Lancet Microbe 2023;4(8):e622 − 31. https://doi.org/10.1016/s2666-5247(23)00108-8.

[2]

Chen Y, Yu CS, Yin XR, Guo XL, Wu SW, Hou JL. Hepatitis C virus genotypes and subtypes circulating in Mainland China. Emerg Microbes Infect 2017;6(11):e95. http://dx.doi.org/10.1038/emi.2017.77.

[3]

Jia YY, Zou X, Yue W, Liu J, Yue M, Liu Y, et al. The distribution of hepatitis C viral genotypes shifted among chronic hepatitis C patients in Yunnan, China, between 2008-2018. Front Cell Infect Microbiol 2023;13:1092936. https://doi.org/10.3389/fcimb.2023.1092936.

[4]

Li HX, Huang HT, Huang WY, Du M, Long DL, Xu GX, et al. Hepatitis C virus subtype diversity and transmission clusters characteristics among drug users in Zhuhai, South China. BMC Infect Dis 2024;24(1):451. https://doi.org/10.1186/s12879-024-09323-y.

[5]

Ye JR, Sun YM, Li J, Lu XL, Zheng MN, Liu LF, et al. Distribution pattern, molecular transmission networks, and phylodynamic of hepatitis C virus in China. PLoS One 2023;18(12):e0296053. https://doi.org/10.1371/journal.pone.0296053.

[6]

Smith DB, Bukh J, Kuiken C, Muerhoff AS, Rice CM, Stapleton JT, et al. Expanded classification of hepatitis C virus into 7 genotypes and 67 subtypes: updated criteria and genotype assignment web resource. Hepatology 2014;59(1):318 − 27. https://doi.org/10.1002/hep.26744.

[7]

Weaver S, Dávila Conn VM, Ji D, Verdonk H, Ávila-Ríos S, Leigh Brown AJ, et al. AUTO-TUNE: selecting the distance threshold for inferring HIV transmission clusters. Front Bioinform 2024;4:1400003. https://doi.org/10.3389/fbinf.2024.1400003.

[8]

Lu L, Wang M, Xia WJ, Tian LW, Xu R, Li CH, et al. Migration patterns of hepatitis C virus in China characterized for five major subtypes based on samples from 411 volunteer blood donors from 17 provinces and municipalities. J Virol 2014;88(13):7120 − 9. https://doi.org/10.1128/jvi.00414-14.

[9]

Nakano T, Lu L, He YS, Fu YS, Robertson BH, Pybus OG. Population genetic history of hepatitis C virus 1b infection in China. J Gen Virol 2006;87(1):73 − 82. https://doi.org/10.1099/vir.0.81360-0.

[10]

Lu L, Nakano T, He YS, Fu YS, Hagedorn CH, Robertson BH. Hepatitis C virus genotype distribution in China: predominance of closely related subtype 1b isolates and existence of new genotype 6 variants. J Med Virol 2005;75(4):538 − 49. https://doi.org/10.1002/jmv.20307.